s function templates Search Results


90
MathWorks Inc matlab function convert_template_to_subject
Matlab Function Convert Template To Subject, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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MathWorks Inc s-function templates
S Function Templates, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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MathWorks Inc lsqnonlin
Lsqnonlin, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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MathWorks Inc imregister function
Imregister Function, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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MathWorks Inc matlab function imtransform
Matlab Function Imtransform, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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MathWorks Inc matlab s-function template
Matlab S Function Template, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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MathWorks Inc level 2 matlab s-function
Level 2 Matlab S Function, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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92
Addgene inc saccharomyces cerevisiae
Functional characterization of MAX1 analogs from S. bicolor . (A) Phylogenetic analysis of MAX1 analogs. The phylogenetic tree was reconstructed in MEGA X using the neighbor-joining method based on amino acid sequence. The MAX1 analogs are from dicotyledons and monocotyledons. Species abbreviations: Sb, Sorghum biocolor ; Ml, Miscanthus lutarioriparius ; Zm, Zea mays ; Bd, Brachypodium distachyon ; Os, Oryza sativa ; Amt, Amborella trichopoda ; At, Arabidopsis thaliana ; Ac, Aquilegia coerulea ; Pg, Picea glauca ; Sm, Selaginella moellendorffii . For the accession numbers of proteins, see . UP, Unknown product; ND, no detected. (B) SIM extracted ion chromatogram (EIC) at m/z – = 331.1 (green), 347.1 (purple), and m/z + = 331.1 (orange), 347.1 (blue) of CL-producing E. coli co-cultured with A. thaliana P450 reductase 1 (ATR1)-expressing yeast (i) expressing AtMAX1, (ii–v) expressing SbMAX1a–d, and (vi) standards of OB, 4DO, and 5DS. CLA shows characteristic m/z – = 331.1 ( MW = 332.40, [C 19 H 24 O 5 -H] – = [C 19 H 23 O 5 ] – = 331.1); 18-hydroxy-CLA shows characteristic m/z – = 347.1 and m/z + = 331.1 ( MW = 348.40, [C 19 H 24 O 6 -H] – = [C 19 H 23 O 6 ] – = 347.1, [C 19 H 24 O 6 -H 2 O + H] + = [C 19 H 23 O 5 ] + = 331.1); OB shows characteristic m/z + = 347.1 ( MW = 346.38, [C 19 H 22 O 6 + H] + = [C 19 H 23 O 6 ] + = 347.1); 4DO and 5DS show characteristic m/z + signal ( MW = 330.38, [C 19 H 22 O 5 + H] + = [C 19 H 23 O 5 ] + = 331.1). All the traces are representative of at least three biological replicates for each engineered E. coli - S. <t>cerevisiae</t> consortium. 18-OH-CLA stands for 18-hydroxy-CLA. MW stands for molecular weight. Strain used for analysis: AtMAX1 (ECL/YSL1, ), SbMAX1a-d (ECL/YSL2a–d, ).
Saccharomyces Cerevisiae, supplied by Addgene inc, used in various techniques. Bioz Stars score: 92/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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90
MathWorks Inc s-function
Functional characterization of MAX1 analogs from S. bicolor . (A) Phylogenetic analysis of MAX1 analogs. The phylogenetic tree was reconstructed in MEGA X using the neighbor-joining method based on amino acid sequence. The MAX1 analogs are from dicotyledons and monocotyledons. Species abbreviations: Sb, Sorghum biocolor ; Ml, Miscanthus lutarioriparius ; Zm, Zea mays ; Bd, Brachypodium distachyon ; Os, Oryza sativa ; Amt, Amborella trichopoda ; At, Arabidopsis thaliana ; Ac, Aquilegia coerulea ; Pg, Picea glauca ; Sm, Selaginella moellendorffii . For the accession numbers of proteins, see . UP, Unknown product; ND, no detected. (B) SIM extracted ion chromatogram (EIC) at m/z – = 331.1 (green), 347.1 (purple), and m/z + = 331.1 (orange), 347.1 (blue) of CL-producing E. coli co-cultured with A. thaliana P450 reductase 1 (ATR1)-expressing yeast (i) expressing AtMAX1, (ii–v) expressing SbMAX1a–d, and (vi) standards of OB, 4DO, and 5DS. CLA shows characteristic m/z – = 331.1 ( MW = 332.40, [C 19 H 24 O 5 -H] – = [C 19 H 23 O 5 ] – = 331.1); 18-hydroxy-CLA shows characteristic m/z – = 347.1 and m/z + = 331.1 ( MW = 348.40, [C 19 H 24 O 6 -H] – = [C 19 H 23 O 6 ] – = 347.1, [C 19 H 24 O 6 -H 2 O + H] + = [C 19 H 23 O 5 ] + = 331.1); OB shows characteristic m/z + = 347.1 ( MW = 346.38, [C 19 H 22 O 6 + H] + = [C 19 H 23 O 6 ] + = 347.1); 4DO and 5DS show characteristic m/z + signal ( MW = 330.38, [C 19 H 22 O 5 + H] + = [C 19 H 23 O 5 ] + = 331.1). All the traces are representative of at least three biological replicates for each engineered E. coli - S. <t>cerevisiae</t> consortium. 18-OH-CLA stands for 18-hydroxy-CLA. MW stands for molecular weight. Strain used for analysis: AtMAX1 (ECL/YSL1, ), SbMAX1a-d (ECL/YSL2a–d, ).
S Function, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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MathWorks Inc s-function template file 'sfuntmpl.m
Functional characterization of MAX1 analogs from S. bicolor . (A) Phylogenetic analysis of MAX1 analogs. The phylogenetic tree was reconstructed in MEGA X using the neighbor-joining method based on amino acid sequence. The MAX1 analogs are from dicotyledons and monocotyledons. Species abbreviations: Sb, Sorghum biocolor ; Ml, Miscanthus lutarioriparius ; Zm, Zea mays ; Bd, Brachypodium distachyon ; Os, Oryza sativa ; Amt, Amborella trichopoda ; At, Arabidopsis thaliana ; Ac, Aquilegia coerulea ; Pg, Picea glauca ; Sm, Selaginella moellendorffii . For the accession numbers of proteins, see . UP, Unknown product; ND, no detected. (B) SIM extracted ion chromatogram (EIC) at m/z – = 331.1 (green), 347.1 (purple), and m/z + = 331.1 (orange), 347.1 (blue) of CL-producing E. coli co-cultured with A. thaliana P450 reductase 1 (ATR1)-expressing yeast (i) expressing AtMAX1, (ii–v) expressing SbMAX1a–d, and (vi) standards of OB, 4DO, and 5DS. CLA shows characteristic m/z – = 331.1 ( MW = 332.40, [C 19 H 24 O 5 -H] – = [C 19 H 23 O 5 ] – = 331.1); 18-hydroxy-CLA shows characteristic m/z – = 347.1 and m/z + = 331.1 ( MW = 348.40, [C 19 H 24 O 6 -H] – = [C 19 H 23 O 6 ] – = 347.1, [C 19 H 24 O 6 -H 2 O + H] + = [C 19 H 23 O 5 ] + = 331.1); OB shows characteristic m/z + = 347.1 ( MW = 346.38, [C 19 H 22 O 6 + H] + = [C 19 H 23 O 6 ] + = 347.1); 4DO and 5DS show characteristic m/z + signal ( MW = 330.38, [C 19 H 22 O 5 + H] + = [C 19 H 23 O 5 ] + = 331.1). All the traces are representative of at least three biological replicates for each engineered E. coli - S. <t>cerevisiae</t> consortium. 18-OH-CLA stands for 18-hydroxy-CLA. MW stands for molecular weight. Strain used for analysis: AtMAX1 (ECL/YSL1, ), SbMAX1a-d (ECL/YSL2a–d, ).
S Function Template File 'sfuntmpl.M, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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90
MathWorks Inc matlab function findpeaks
Functional characterization of MAX1 analogs from S. bicolor . (A) Phylogenetic analysis of MAX1 analogs. The phylogenetic tree was reconstructed in MEGA X using the neighbor-joining method based on amino acid sequence. The MAX1 analogs are from dicotyledons and monocotyledons. Species abbreviations: Sb, Sorghum biocolor ; Ml, Miscanthus lutarioriparius ; Zm, Zea mays ; Bd, Brachypodium distachyon ; Os, Oryza sativa ; Amt, Amborella trichopoda ; At, Arabidopsis thaliana ; Ac, Aquilegia coerulea ; Pg, Picea glauca ; Sm, Selaginella moellendorffii . For the accession numbers of proteins, see . UP, Unknown product; ND, no detected. (B) SIM extracted ion chromatogram (EIC) at m/z – = 331.1 (green), 347.1 (purple), and m/z + = 331.1 (orange), 347.1 (blue) of CL-producing E. coli co-cultured with A. thaliana P450 reductase 1 (ATR1)-expressing yeast (i) expressing AtMAX1, (ii–v) expressing SbMAX1a–d, and (vi) standards of OB, 4DO, and 5DS. CLA shows characteristic m/z – = 331.1 ( MW = 332.40, [C 19 H 24 O 5 -H] – = [C 19 H 23 O 5 ] – = 331.1); 18-hydroxy-CLA shows characteristic m/z – = 347.1 and m/z + = 331.1 ( MW = 348.40, [C 19 H 24 O 6 -H] – = [C 19 H 23 O 6 ] – = 347.1, [C 19 H 24 O 6 -H 2 O + H] + = [C 19 H 23 O 5 ] + = 331.1); OB shows characteristic m/z + = 347.1 ( MW = 346.38, [C 19 H 22 O 6 + H] + = [C 19 H 23 O 6 ] + = 347.1); 4DO and 5DS show characteristic m/z + signal ( MW = 330.38, [C 19 H 22 O 5 + H] + = [C 19 H 23 O 5 ] + = 331.1). All the traces are representative of at least three biological replicates for each engineered E. coli - S. <t>cerevisiae</t> consortium. 18-OH-CLA stands for 18-hydroxy-CLA. MW stands for molecular weight. Strain used for analysis: AtMAX1 (ECL/YSL1, ), SbMAX1a-d (ECL/YSL2a–d, ).
Matlab Function Findpeaks, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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MathWorks Inc c mex s function template file
Functional characterization of MAX1 analogs from S. bicolor . (A) Phylogenetic analysis of MAX1 analogs. The phylogenetic tree was reconstructed in MEGA X using the neighbor-joining method based on amino acid sequence. The MAX1 analogs are from dicotyledons and monocotyledons. Species abbreviations: Sb, Sorghum biocolor ; Ml, Miscanthus lutarioriparius ; Zm, Zea mays ; Bd, Brachypodium distachyon ; Os, Oryza sativa ; Amt, Amborella trichopoda ; At, Arabidopsis thaliana ; Ac, Aquilegia coerulea ; Pg, Picea glauca ; Sm, Selaginella moellendorffii . For the accession numbers of proteins, see . UP, Unknown product; ND, no detected. (B) SIM extracted ion chromatogram (EIC) at m/z – = 331.1 (green), 347.1 (purple), and m/z + = 331.1 (orange), 347.1 (blue) of CL-producing E. coli co-cultured with A. thaliana P450 reductase 1 (ATR1)-expressing yeast (i) expressing AtMAX1, (ii–v) expressing SbMAX1a–d, and (vi) standards of OB, 4DO, and 5DS. CLA shows characteristic m/z – = 331.1 ( MW = 332.40, [C 19 H 24 O 5 -H] – = [C 19 H 23 O 5 ] – = 331.1); 18-hydroxy-CLA shows characteristic m/z – = 347.1 and m/z + = 331.1 ( MW = 348.40, [C 19 H 24 O 6 -H] – = [C 19 H 23 O 6 ] – = 347.1, [C 19 H 24 O 6 -H 2 O + H] + = [C 19 H 23 O 5 ] + = 331.1); OB shows characteristic m/z + = 347.1 ( MW = 346.38, [C 19 H 22 O 6 + H] + = [C 19 H 23 O 6 ] + = 347.1); 4DO and 5DS show characteristic m/z + signal ( MW = 330.38, [C 19 H 22 O 5 + H] + = [C 19 H 23 O 5 ] + = 331.1). All the traces are representative of at least three biological replicates for each engineered E. coli - S. <t>cerevisiae</t> consortium. 18-OH-CLA stands for 18-hydroxy-CLA. MW stands for molecular weight. Strain used for analysis: AtMAX1 (ECL/YSL1, ), SbMAX1a-d (ECL/YSL2a–d, ).
C Mex S Function Template File, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Functional characterization of MAX1 analogs from S. bicolor . (A) Phylogenetic analysis of MAX1 analogs. The phylogenetic tree was reconstructed in MEGA X using the neighbor-joining method based on amino acid sequence. The MAX1 analogs are from dicotyledons and monocotyledons. Species abbreviations: Sb, Sorghum biocolor ; Ml, Miscanthus lutarioriparius ; Zm, Zea mays ; Bd, Brachypodium distachyon ; Os, Oryza sativa ; Amt, Amborella trichopoda ; At, Arabidopsis thaliana ; Ac, Aquilegia coerulea ; Pg, Picea glauca ; Sm, Selaginella moellendorffii . For the accession numbers of proteins, see . UP, Unknown product; ND, no detected. (B) SIM extracted ion chromatogram (EIC) at m/z – = 331.1 (green), 347.1 (purple), and m/z + = 331.1 (orange), 347.1 (blue) of CL-producing E. coli co-cultured with A. thaliana P450 reductase 1 (ATR1)-expressing yeast (i) expressing AtMAX1, (ii–v) expressing SbMAX1a–d, and (vi) standards of OB, 4DO, and 5DS. CLA shows characteristic m/z – = 331.1 ( MW = 332.40, [C 19 H 24 O 5 -H] – = [C 19 H 23 O 5 ] – = 331.1); 18-hydroxy-CLA shows characteristic m/z – = 347.1 and m/z + = 331.1 ( MW = 348.40, [C 19 H 24 O 6 -H] – = [C 19 H 23 O 6 ] – = 347.1, [C 19 H 24 O 6 -H 2 O + H] + = [C 19 H 23 O 5 ] + = 331.1); OB shows characteristic m/z + = 347.1 ( MW = 346.38, [C 19 H 22 O 6 + H] + = [C 19 H 23 O 6 ] + = 347.1); 4DO and 5DS show characteristic m/z + signal ( MW = 330.38, [C 19 H 22 O 5 + H] + = [C 19 H 23 O 5 ] + = 331.1). All the traces are representative of at least three biological replicates for each engineered E. coli - S. cerevisiae consortium. 18-OH-CLA stands for 18-hydroxy-CLA. MW stands for molecular weight. Strain used for analysis: AtMAX1 (ECL/YSL1, ), SbMAX1a-d (ECL/YSL2a–d, ).

Journal: Frontiers in Plant Science

Article Title: A Unique Sulfotransferase-Involving Strigolactone Biosynthetic Route in Sorghum

doi: 10.3389/fpls.2021.793459

Figure Lengend Snippet: Functional characterization of MAX1 analogs from S. bicolor . (A) Phylogenetic analysis of MAX1 analogs. The phylogenetic tree was reconstructed in MEGA X using the neighbor-joining method based on amino acid sequence. The MAX1 analogs are from dicotyledons and monocotyledons. Species abbreviations: Sb, Sorghum biocolor ; Ml, Miscanthus lutarioriparius ; Zm, Zea mays ; Bd, Brachypodium distachyon ; Os, Oryza sativa ; Amt, Amborella trichopoda ; At, Arabidopsis thaliana ; Ac, Aquilegia coerulea ; Pg, Picea glauca ; Sm, Selaginella moellendorffii . For the accession numbers of proteins, see . UP, Unknown product; ND, no detected. (B) SIM extracted ion chromatogram (EIC) at m/z – = 331.1 (green), 347.1 (purple), and m/z + = 331.1 (orange), 347.1 (blue) of CL-producing E. coli co-cultured with A. thaliana P450 reductase 1 (ATR1)-expressing yeast (i) expressing AtMAX1, (ii–v) expressing SbMAX1a–d, and (vi) standards of OB, 4DO, and 5DS. CLA shows characteristic m/z – = 331.1 ( MW = 332.40, [C 19 H 24 O 5 -H] – = [C 19 H 23 O 5 ] – = 331.1); 18-hydroxy-CLA shows characteristic m/z – = 347.1 and m/z + = 331.1 ( MW = 348.40, [C 19 H 24 O 6 -H] – = [C 19 H 23 O 6 ] – = 347.1, [C 19 H 24 O 6 -H 2 O + H] + = [C 19 H 23 O 5 ] + = 331.1); OB shows characteristic m/z + = 347.1 ( MW = 346.38, [C 19 H 22 O 6 + H] + = [C 19 H 23 O 6 ] + = 347.1); 4DO and 5DS show characteristic m/z + signal ( MW = 330.38, [C 19 H 22 O 5 + H] + = [C 19 H 23 O 5 ] + = 331.1). All the traces are representative of at least three biological replicates for each engineered E. coli - S. cerevisiae consortium. 18-OH-CLA stands for 18-hydroxy-CLA. MW stands for molecular weight. Strain used for analysis: AtMAX1 (ECL/YSL1, ), SbMAX1a-d (ECL/YSL2a–d, ).

Article Snippet: The Saccharomyces cerevisiae ( S. cerevisiae ) Advanced Gateway Destination Vector Kit was obtained from Addgene (Watertown, MA, United States).

Techniques: Functional Assay, Sequencing, Cell Culture, Expressing, Molecular Weight

Functional characterization of LGS1 and analogs using CL-producing microbial consortium expressing SbMAX1a. (A) SIM EIC at m/z – = 331.1 (green), 347.1 (purple), and m/z + = 331.1 (orange), 347.1 (blue) of CL-producing E. coli co-cultured with yeast expressing ATR1, SbMAX1a and (i) empty vector (EV), (ii) LGS1, (iii) LGS1-2, (iv) sulfotransferase (SOT) from Triticum aestivum (TaSOT), (v) SOT from Zea mays (ZmSOT), and (vi) standards of OB, 4DO, and 5DS. All traces are representative of at least three biological replicates for each engineered E. coli - S. cerevisiae consortium. (B) Phylogenetic analysis of LGS1. The phylogenetic tree was reconstructed in MEGA X using the neighbor-joining method based on amino acid sequence. The SOTs are from animals, plants, fungi, and cyanobacteria. For the accession numbers of proteins, see . The sequence of LGS1 is from sorghum WT Shanqui Red, LGS1-2 variation is a reference sequence from NCBI, and is four amino acids (DADD) longer than LGS1, see .

Journal: Frontiers in Plant Science

Article Title: A Unique Sulfotransferase-Involving Strigolactone Biosynthetic Route in Sorghum

doi: 10.3389/fpls.2021.793459

Figure Lengend Snippet: Functional characterization of LGS1 and analogs using CL-producing microbial consortium expressing SbMAX1a. (A) SIM EIC at m/z – = 331.1 (green), 347.1 (purple), and m/z + = 331.1 (orange), 347.1 (blue) of CL-producing E. coli co-cultured with yeast expressing ATR1, SbMAX1a and (i) empty vector (EV), (ii) LGS1, (iii) LGS1-2, (iv) sulfotransferase (SOT) from Triticum aestivum (TaSOT), (v) SOT from Zea mays (ZmSOT), and (vi) standards of OB, 4DO, and 5DS. All traces are representative of at least three biological replicates for each engineered E. coli - S. cerevisiae consortium. (B) Phylogenetic analysis of LGS1. The phylogenetic tree was reconstructed in MEGA X using the neighbor-joining method based on amino acid sequence. The SOTs are from animals, plants, fungi, and cyanobacteria. For the accession numbers of proteins, see . The sequence of LGS1 is from sorghum WT Shanqui Red, LGS1-2 variation is a reference sequence from NCBI, and is four amino acids (DADD) longer than LGS1, see .

Article Snippet: The Saccharomyces cerevisiae ( S. cerevisiae ) Advanced Gateway Destination Vector Kit was obtained from Addgene (Watertown, MA, United States).

Techniques: Functional Assay, Expressing, Cell Culture, Plasmid Preparation, Sequencing